CDS

Accession Number TCMCG013C37541
gbkey CDS
Protein Id XP_024949758.1
Location complement(join(130135..130230,130368..130447,131153..131356,131748..132391,132753..132995,133389..133483,133583..133956,134390..134441,134588..134800,134937..135002,135332..135389,135485..135600,136563..136734,136815..137062,137450..137530,137596..137736,138388..138480,138559..138609,138701..138907,138998..139198,139306..139389,139508..139522))
Gene LOC102614709
GeneID 102614709
Organism Citrus sinensis

Protein

Length 1177aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA225998
db_source XM_025093990.1
Definition tetratricopeptide repeat protein SKI3 isoform X2 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category A
Description tetratricopeptide repeat
KEGG_TC -
KEGG_Module M00392        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12600        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035327        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATAATAAAACGGATGACGAAAAGGGAGCACTTTTATTGCAACTGGAGGATTCCTTAGAAGCCAATCCTGATGACCCCTCCCTCCATTTGGATCTCGGCTTGCACTTGTGGGAGAACTCAGAATCGAAGGAAAAAGCAGCTGAACATTTTGTAATAGCAGCCAAATTGAACCCTCAAAATGCAGTTGCTTTCCGATATTTGGGGCATTATTACACCAGATTTTCTATTGATACCCAAAGAGCTATCAAGTGTTACCAAAGAGCTGTCTCTCTCAGTCCCGATGATTCTGTTTCTGGGGAAGCTTTATGTGAATTGTTGGAGCATGGAGGAAAGGAGAGCTTGGAAGTTGTCGTGTGTAGGGAGGCCTCAGACAAGTCTCCAAGGGCTTTCTGGGCATTTCGTCGCCTGGGTTATCTGCAATTGCATCACAAGAAATGGTCAGAAGCTGTCCAGAGTCTTCAGCATGCCATACGAGGCTATCCAACCTCTCCTCATCTCTGGGAAGCTCTTGGTCTTGCTTACCACCGGCTTGGCATGTTTAGTGCTGCTATTAAGTCCTATGGGCGAGCCATTGAATTGGATGATACAAGTATCTTTCCTCTGCTTGAAAGTGGAAACATCTTTTTGATGCTTGGTAATTTCAGAAAGGGAGTTGAGCAGTTTCAGCTAGCTCTCAAGATTTCATCTGAAAATGTGTCTGCACACTATGGGCTTGCTTCTGGTTTGCTTGGTTTAGCAAAACAATGCATTAATTTGGGTGCATTTAGATGGGGAGCTTCACTGCTGGAGGATGCATGCAAAGTTGCCGAAGCTAATACTCGATTAGCTGGAAATATGTCATGTATATGGAAGTTGCATGGTGATATTCAGCTTACATATGCAAAATGTTTCCCATGGGCGGAGGAGAGACAGAGTTTAGAATTTGATGTGGAAACTTTCAGTGCTTCCATTGTTTCCTGGAAGACGACTTGCCTTATGGCTGCCATATCTTCTAAAAGTTCTTACCAACGAGCTTTGTACTTGGCCCCGTGGCAAGCTAACATCTATACTGATATTGCAATAACTTCAGATCTCATTTACTCTTTAAATGAAGCTTATGGACATTACCAAAGTGCTTGGCATGTGTCTGAGAAGATGGCTTTGGGGGCCTTGTTACTTGAGGGTGACAACTGCCAATTTTGGGTGACATTGGGGTGTTTATCTAACTATAATGGATTAAAACAGCATGCTTTAATCAGGGGATTGCAGCTGGATGTATCTTTAGCTGATGCTTGGGCACACATTGGGAAGCTATATGGAGAAGTGGGTGAGAAGAAGTTAGCAAGGCAAGCATTTGATTCAGCCAGAAGTATAGATCCTTCACTTGCATTACCATGGGCTGGCATGTCAGCTGATGTTCAAGCTAGCGAATCCTTAGTGGATGATGCTTTTGAGAGCTGTTTACGAGCTGTGCAGATATTACCTCTTGCTGAGTTCCAAATTGGTCTAGCTAAGCTTGCTAAACTGTCAGGGCACCTTTCATCTTCACAGGTTTTTGGAGCCATCCAGCAGGCAATACAACGTGGTCCTCATTATCCTGAATCCCATAACTTGTATGGGTTAGTTTGTGAGGCACGGTCTGACTATCAAGCTGCCGTTGTTTCTTATAGGCTAGCACGCTATGCAATTAGCTCTTCTTCAGGCACTGTTCCAAATTCCCATTTCCAAGATATATCCATTAACTTGGCCAGATCACTTAGTAGGGCAGGGAACGCATTGGATGCTGTACGAGAATGTGAAAGTTTGGAAAGACAAGGCATGCTTGATGCGGAAGTATTGCAAGTATATGCCTTCTCTCTGTGGCAACTTGGTAAATATGACCTGGCCCTTTCCATGGCTAGAAATCTGGCTTCAAGTGTGTCTGCCATGGAACAATCATCTGCAGCTGCGTCTGTTAGTTTTATCTGCCGATTGCTTTACCACATCTCTGGACTCGATTCAACAATTAATAGCATTCTGAAAATGCCAAAGGGGCTGTTTCAGTGTTCAAAAATGAGCTTCATAGTGTCTGCCATCCATGCTCTTGATCATAGTAATCGCCTTGAATCTGTTGTTTCAAGCAGTCGAAACTGTATTGCATCTCCTGAAGAAATCACTGGAATGCACTATTTAGTAGCACTTAATAAATTGGTTAAAAATGGACCTGAATCCTGCCTTGGATTTAATAGTGGAATATTCCACCTCAGAAAAGTTCTTCATGTTTACCCTAATTGTAATCTGATAAGGAACTTACTTGGTTATCTCTTGCTATCAAGTGACGAATGGAGATATTCACATGTTGCAAGTAGGTGCTGCAGCCTAGAGACATCGGACTGTATAAAAAAGGAAGGTCCAAAGTCAGCATGGGAGATCCTTGGTGCTGAAGGGGTTGCTTGCAATGTCATAGGCAGTGTTGATCTTAAGTTTTCTTTTCCAACCTGTATTTATGAGCATTTGACTGGACCTAAAGCTGTTCAAGAGTTGCAGAAATGCTTGCATCGAGAACCATGGAACTATAACGTGCGGTATTTGCTTGTACTTAATCTTTTACAAAAGGCACGCGAAGAGAGATTTCCTCGGCATCTCTGTACCATACTTCAACGGCTAATTCATGTCGCTCTTTCCTGTGAATTCTATTCTATACAACATACATCATATCAATACCAAAAGTTTCAGCTTCTTCTCTGCGCTTCTGAGATCAGTTTGCAAGGTGGAAATATTACTGGGTGTATCAACCATGCAAAAAGTGCTTCAGCCCTCTTACTTCCTGATGCCTACCGATTTTTTGGACACTTGCTACTATCCCGTGCCTATGCTGCAGAAGGTAATATGTTAAACCTTCAGGATGAATATGTAAGATGTTTAGAACTCAAGACAGATTATGTAATTGGCTGGATGTGTCTCAAAGTCGTGGAATCTCTATATGAAGTGCAAGCTGACACAAATACCATAGAGTTGAGCTTCAACGAATGCTTAAAACAGGGGAATAATTCCAGGCTGATTTGGACTGCTAAATTTAATTTGGTGTTGGGTTTTGTTTTCCTATGGAAGAAGGATTTTTTTTCTGCCGAGAAGTGTCTTGCACAAGCTTGTTCGTTGGCGGGTGCTGAGAGCTGCCTTTTTCTGTGTCATGGTACCATCTGCATGGAGATTGCAAGGCAGTATCACGATTCTCATTTTTTGTCACTAGCAGTAAGAAGTCTTACCAAAGCCCAAAAAACTTCCTTTGTTCAGTTGCCTGTGGTCTCACTATTACTGGCTCAAGCGGAAGGAAGCCTATCTTCTATAGAAAAATGGGAGAAAAACCTTCGTCTGGAATGGTTTACTTGGCCACCAGAAATGAGGCCTGCAGAGCTTTTTTTCCAAATGCATTTGCTTGCAATGTTGTCGAAAGCTGGGTCTGACTCTTCCTCAAGAGTAATTTTGAAGAACCTCTATTTGGACAGATTCCCTCCCGACTCCTGTCAATACAATCCGCTTCTTCTGGCCACCCAAATCTATATAGCTGATTGA
Protein:  
MNNKTDDEKGALLLQLEDSLEANPDDPSLHLDLGLHLWENSESKEKAAEHFVIAAKLNPQNAVAFRYLGHYYTRFSIDTQRAIKCYQRAVSLSPDDSVSGEALCELLEHGGKESLEVVVCREASDKSPRAFWAFRRLGYLQLHHKKWSEAVQSLQHAIRGYPTSPHLWEALGLAYHRLGMFSAAIKSYGRAIELDDTSIFPLLESGNIFLMLGNFRKGVEQFQLALKISSENVSAHYGLASGLLGLAKQCINLGAFRWGASLLEDACKVAEANTRLAGNMSCIWKLHGDIQLTYAKCFPWAEERQSLEFDVETFSASIVSWKTTCLMAAISSKSSYQRALYLAPWQANIYTDIAITSDLIYSLNEAYGHYQSAWHVSEKMALGALLLEGDNCQFWVTLGCLSNYNGLKQHALIRGLQLDVSLADAWAHIGKLYGEVGEKKLARQAFDSARSIDPSLALPWAGMSADVQASESLVDDAFESCLRAVQILPLAEFQIGLAKLAKLSGHLSSSQVFGAIQQAIQRGPHYPESHNLYGLVCEARSDYQAAVVSYRLARYAISSSSGTVPNSHFQDISINLARSLSRAGNALDAVRECESLERQGMLDAEVLQVYAFSLWQLGKYDLALSMARNLASSVSAMEQSSAAASVSFICRLLYHISGLDSTINSILKMPKGLFQCSKMSFIVSAIHALDHSNRLESVVSSSRNCIASPEEITGMHYLVALNKLVKNGPESCLGFNSGIFHLRKVLHVYPNCNLIRNLLGYLLLSSDEWRYSHVASRCCSLETSDCIKKEGPKSAWEILGAEGVACNVIGSVDLKFSFPTCIYEHLTGPKAVQELQKCLHREPWNYNVRYLLVLNLLQKAREERFPRHLCTILQRLIHVALSCEFYSIQHTSYQYQKFQLLLCASEISLQGGNITGCINHAKSASALLLPDAYRFFGHLLLSRAYAAEGNMLNLQDEYVRCLELKTDYVIGWMCLKVVESLYEVQADTNTIELSFNECLKQGNNSRLIWTAKFNLVLGFVFLWKKDFFSAEKCLAQACSLAGAESCLFLCHGTICMEIARQYHDSHFLSLAVRSLTKAQKTSFVQLPVVSLLLAQAEGSLSSIEKWEKNLRLEWFTWPPEMRPAELFFQMHLLAMLSKAGSDSSSRVILKNLYLDRFPPDSCQYNPLLLATQIYIAD